PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g013380.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GATA | ||||||||
Protein Properties | Length: 206aa MW: 22490.3 Da PI: 9.7803 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 51.7 | 1.2e-16 | 7 | 41 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+ Pd.00g013380.m01 7 CYHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGT 41 ****************55555***********997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MGKQGPCYHC GVTSTPLWRN GPPDKPVLCN ACGSRWRTKG TLANYTPLHA RAEPDDYEDH 60 RVSRVKSISI NKNKEIKLVK RKQNPDSVMV GGVAADYAHG FRKVTDEDTS NRSSSGSAVS 120 NSESCAQFGS ADASDLTGPA QSMVWDSMVP SRKRTCIGRP KPSPVEKLTK DLYTILHEQQ 180 SSYFSGKVMQ PNSQARLSTL KVAVSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17570.3 | 5e-71 | GATA family protein |