PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g013110.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 254aa MW: 29341.1 Da PI: 5.9864 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 30.9 | 6.9e-10 | 21 | 68 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54 s++kGV+ k +g W A+I + k ++lg + +eeAa a+++a+ kl Pd.00g013110.m01 21 SRFKGVSLLK-SGNWGARISYmY------KPYWLGAYQMEEEAAIAYDRAAIKLQ 68 789*****99.7******87733......**********************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MEAEFVSESR VDMVLQRGPS SRFKGVSLLK SGNWGARISY MYKPYWLGAY QMEEEAAIAY 60 DRAAIKLQRG DTPLNFHWSK YSAEESIFQS QYSTEEILSM LKDKTYSSKL MNFLSRHSSG 120 SGTRTTTFMN EQGISYHFLF QKELTHRDVT HKCFLIPREF SFRCLPPPEG IINAGEDEAR 180 MNNLNQKDIV MFYRCEYEGE VLGREVYMID YQRSNGENYV LEHSSGSSTI ELEADCKEKE 240 TKKGFKLFGV EING |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50680.1 | 1e-23 | RAV family protein |