PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g009700.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | TCP | ||||||||
Protein Properties | Length: 333aa MW: 36705.2 Da PI: 10.3877 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 106.8 | 3.4e-33 | 43 | 125 | 2 | 82 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssa 82 +g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el +++s +++++ +++s ++a Pd.00g009700.m01 43 TGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELDELPSWNPHSVstTTASTAVTA 125 79**************************************************************5555533322111111111 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MGDTHHHHHP QATTSSRLGI RPSSGLSADI VEVVRGSHIV RSTGRKDRHS KVCTAKGPRD 60 RRVRLAAHTA IQFYDVQDRL GYDRPSKAVD WLIKKAKAAI DELDELPSWN PHSVSTTTAS 120 TAVTAMEAQN PTTTGFHCFE AVDAIGSANG RATMVGSGVS EQIVQNQNPL TNSTLLPPSL 180 DSDAIADTIK SFFPMGASAG AAEAPSSTIQ FQNYPPDLLS RTSSQSQDLR LSLHSFQDPI 240 LLQHQQAQAQ HHQAQTHQNE QTLFSGTQQQ NPLGRILRLP HPCTNSRRGG TRRHLRQAVL 300 CFLQFSPLKQ TKKKTELLFK GLRLISTFHR ETK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 3e-47 | TCP family protein |