PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g005880.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 538aa MW: 58268.7 Da PI: 4.9046 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.6 | 2.5e-17 | 17 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lv++vk++G g+W+++ ++ g+ R++k+c++rw ++l Pd.00g005880.m01 17 KGPWTSAEDAILVEYVKEHGEGNWNAVQKHSGLFRCGKSCRLRWANHL 64 79******************************************9986 PP | |||||||
2 | Myb_DNA-binding | 49.8 | 7.8e-16 | 70 | 113 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE+ l+v++++++G++ W+ a++++ gRt++++k++w++ Pd.00g005880.m01 70 KGAFTPEEEHLIVELHAKMGNK-WACMAAHLP-GRTDNEIKNYWNT 113 799*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 538 aa Download sequence |
MDESNGGTGN GGIVLKKGPW TSAEDAILVE YVKEHGEGNW NAVQKHSGLF RCGKSCRLRW 60 ANHLRPNLKK GAFTPEEEHL IVELHAKMGN KWACMAAHLP GRTDNEIKNY WNTRIKRRQR 120 AGLPLYPPEV CLQALQESQQ GQSSGGINGA DRAHHDSLQP NSYEIPDVVF ESLKGNNCVL 180 PYVPEIPDLS ASGVLMKGLS SSPYCGFMPQ TMHRQKRLRE STSLFSTSDG SFKNGFPQFD 240 HFQDDTCDKV GQSFGLPFPH DPDPTTKSPL SFGVIQGSHS LSNGNSSASK PTSGAVKLEL 300 PSLQYPETDL GSWSTSPPPP LLESIDAFIQ SPPPVGAFES DCASPRNSGL LDALLHEAKT 360 LSSAKNLSSD KSSNSSSATP GDIADSSTLN ICETEWEDYR DPISPLGHSA TSLFSECTPI 420 SASGSSLDEP PPAETFTGCN VKPEPVDQAW TPDKEKETTP QLDYTRPDAL LASDWLEHST 480 GFKDQGMTDS IASILGDDLA TDYRHMASGT SISNQVWGLG SCLWNNMPAV CQMSSDLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06100.3 | 1e-132 | MYB family protein |