PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g002350.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 90aa    MW: 10269.6 Da    PI: 7.3641
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g002350.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.81.4e-0617561554
                      HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                      +i++   +L+ llP+ + + ++  +s ++iLe+++ YI+ L
  Pd.00g002350.m01 17 EIKELVLKLKPLLPQlD-HRRNASVSASSILEETCSYIRRL 56
                      68888889*******55.889999***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MSSRRSSSGA SKLADDEIKE LVLKLKPLLP QLDHRRNASV SASSILEETC SYIRRLNKEV  60
DDLSQRLSQL LDSADITDVD EQLIRRLFQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47710.15e-08bHLH family protein