PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g002000.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 368aa MW: 40653.3 Da PI: 6.4461

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g002000.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.5	1.2e-09	110	147	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gLt +qV++WF N R + Pd.00g002000.m01 110 FEHflHPYPKDSDKIMLARQTGLTRSQVSNWFINARVR 147 665559******************************88 PP
2	BELL	71.5	1.4e-23	1	43	30	72
BELL 30 lqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +q+v+ssF+++ag+g+akpYt++Al++iSrhFrcL+dai++qi Pd.00g002000.m01 1 MQIVVSSFDVIAGCGAAKPYTAVALQTISRHFRCLRDAITGQI 43 9*****************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MQIVVSSFDV IAGCGAAKPY TAVALQTISR HFRCLRDAIT GQIRATRKSL GEEGASGSIK 60 GVGISRLRYV DQQLRQQRAL QQLGMMQQHA WRPQRGLPES SVSILRAWLF EHFLHPYPKD 120 SDKIMLARQT GLTRSQVSNW FINARVRLWK PMVEEMYKEE AGDAEMDSNS SSENAPQTKK 180 SDMRTMEDGV EDMQPSASST CTERCSTGQF MDSKSDHFHD VEMAGSTGSA SFQNGTRREA 240 EAQYGLVKLR EGQRAGMDDC SLFSDPNVHS DRSSERFMEA ADAYHMPELG RFGSGSGVSL 300 TLGLQHCDGG SLPISTGTHH SFVAMRGDDL YNPAASSVGS ETADFECMDS GNQQHRFGSS 360 HLLRDFVV

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MQIVVSSFDV IAGCGAAKPY TAVALQTISR HFRCLRDAIT GQIRATRKSL GEEGASGSIK  60
GVGISRLRYV DQQLRQQRAL QQLGMMQQHA WRPQRGLPES SVSILRAWLF EHFLHPYPKD  120
SDKIMLARQT GLTRSQVSNW FINARVRLWK PMVEEMYKEE AGDAEMDSNS SSENAPQTKK  180
SDMRTMEDGV EDMQPSASST CTERCSTGQF MDSKSDHFHD VEMAGSTGSA SFQNGTRREA  240
EAQYGLVKLR EGQRAGMDDC SLFSDPNVHS DRSSERFMEA ADAYHMPELG RFGSGSGVSL  300
TLGLQHCDGG SLPISTGTHH SFVAMRGDDL YNPAASSVGS ETADFECMDS GNQQHRFGSS  360
HLLRDFVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	2e-90	TALE family protein