PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g001050.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 442aa MW: 48836.2 Da PI: 6.9376

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g001050.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.2	6.1e-08	346	386	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P K++ a++L +A +Y+k L Pd.00g001050.m01 346 ARQRRERISERIRVLQRLVPGG-----SKMDTASMLDEAANYLKFL 386 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MDGSDWDGSY ITNTSTLLWN NHQVHDLEES LLVSSSGPSA FIPIQDFQKV QTSHAIMNSN 60 TERASKSALI VHQQNPCLLD SVHAMPTLRA DQLCQAPWMI NKPNYNLMGS LSTGIFMAAD 120 HYGDTGKHVQ TQVIHGLQDH GRAKPATTRS VESLDCLLSG TNSNTDTSVE DDDGISMLFS 180 DCRRNLWNFG AGNNSAISSG ESENNETVVS QSSSDLYVQS QGKKNSTKRS HDQSELNGAN 240 HSHFGLLQTD SSTTEGGFRL ISENPPNPKK PRSDKRPSSS NINFQQPSSS VSASSIEEPD 300 PEVIAQMKEM IYRAAAFRPV NLGMDMVERP KRKNVKISSD PQTVAARQRR ERISERIRVL 360 QRLVPGGSKM DTASMLDEAA NYLKFLRSQV KALENLGQKI ESMSNSNIPP TSFAFSFNPS 420 FPMQTHHHVP LHNSNHIHQP HS

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MDGSDWDGSY ITNTSTLLWN NHQVHDLEES LLVSSSGPSA FIPIQDFQKV QTSHAIMNSN  60
TERASKSALI VHQQNPCLLD SVHAMPTLRA DQLCQAPWMI NKPNYNLMGS LSTGIFMAAD  120
HYGDTGKHVQ TQVIHGLQDH GRAKPATTRS VESLDCLLSG TNSNTDTSVE DDDGISMLFS  180
DCRRNLWNFG AGNNSAISSG ESENNETVVS QSSSDLYVQS QGKKNSTKRS HDQSELNGAN  240
HSHFGLLQTD SSTTEGGFRL ISENPPNPKK PRSDKRPSSS NINFQQPSSS VSASSIEEPD  300
PEVIAQMKEM IYRAAAFRPV NLGMDMVERP KRKNVKISSD PQTVAARQRR ERISERIRVL  360
QRLVPGGSKM DTASMLDEAA NYLKFLRSQV KALENLGQKI ESMSNSNIPP TSFAFSFNPS  420
FPMQTHHHVP LHNSNHIHQP HS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	347	352	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	1e-70	bHLH family protein