PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g000050.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 220aa MW: 24188.8 Da PI: 6.5239 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.7 | 7.1e-19 | 70 | 120 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr ++ +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a+++++g Pd.00g000050.m01 70 PVYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFSTAEMAARAHDVAALSIKG 120 68*****998.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MAAEPNNSEL AQSTSNSSSS SRLLQTHPTS PSNSLKSKTK THKASTQHQQ QHQVALKRKR 60 DDDSSSSKHP VYRGVRMRSW GKWVSEIREP RKKSRIWLGT FSTAEMAARA HDVAALSIKG 120 NSAILNFPEL AELLPRPASL KPQDVQAAAT KAAAMSEGPE SEELGEIVEL PNIEGSFDSP 180 ESRNEFIFVN DSEDGWVYPS MGLDGVEFNL WGFFSSDNGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 4e-52 | ERF family protein |