PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP045127.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 590aa MW: 65298.8 Da PI: 8.7268

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP045127.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.8	1.7e-12	243	288	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L +Av+YIk+Lq PCP045127.1 243 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVDYIKDLQ 288 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 590 aa Download sequence
MDSNTHQPNS GMLRFRSAPG SLLANFADGG DSGLHSKNPV EGSLESERLF SRFANYSHTN 60 DSDSWPSSFQ ELDDKSVVTA TKAAVPASRV SSQGGYSGLL PPHYPRQSSF NGGYGLAGSG 120 AMEHHHTAAN KSLHSTSNVV RQSSSPAGLF SNTSVQNGFP FGTWNNSSNF PENIGGLKRD 180 HHDGKLFSVD QSGELENRNH VLSHHLSLPK TSAEMAMEKF LQLQDSVPCK VRAKRGCATH 240 PRSIAERVRR TRISERMRKL QELVPNMDKQ TNTADMLDLA VDYIKDLQKQ FKTLSDVRAN 300 CKCLNMQKQK VARFSTTNME GTRSCINKQL EFPIPMVIIV LRSFTSRTYY IDCGIENQSV 360 WGPVVARMSN LYGDYNQKID YVFKVVLIGD SAVGKTQLLA RFARNEFSVD SKATIGVEFQ 420 TKTLVLDHKT VKAQIWDTAG QERYRAVTSA YYRGAVGAML VYDMTKHQSF DHMARWLEEL 480 RGHADKNIVI MLIGNKCDLG SLRAVPMEDA HEFAQRENLF FMETSALEAT NVETAFLMIL 540 MEIYRIMSKK PLAAGDLNSG DSGLLKGTTI IVPGPDGDGA RKGGCCFSST

Sequence ? help Back to Top

Protein Sequence Length: 590 aa Download sequence

MDSNTHQPNS GMLRFRSAPG SLLANFADGG DSGLHSKNPV EGSLESERLF SRFANYSHTN  60
DSDSWPSSFQ ELDDKSVVTA TKAAVPASRV SSQGGYSGLL PPHYPRQSSF NGGYGLAGSG  120
AMEHHHTAAN KSLHSTSNVV RQSSSPAGLF SNTSVQNGFP FGTWNNSSNF PENIGGLKRD  180
HHDGKLFSVD QSGELENRNH VLSHHLSLPK TSAEMAMEKF LQLQDSVPCK VRAKRGCATH  240
PRSIAERVRR TRISERMRKL QELVPNMDKQ TNTADMLDLA VDYIKDLQKQ FKTLSDVRAN  300
CKCLNMQKQK VARFSTTNME GTRSCINKQL EFPIPMVIIV LRSFTSRTYY IDCGIENQSV  360
WGPVVARMSN LYGDYNQKID YVFKVVLIGD SAVGKTQLLA RFARNEFSVD SKATIGVEFQ  420
TKTLVLDHKT VKAQIWDTAG QERYRAVTSA YYRGAVGAML VYDMTKHQSF DHMARWLEEL  480
RGHADKNIVI MLIGNKCDLG SLRAVPMEDA HEFAQRENLF FMETSALEAT NVETAFLMIL  540
MEIYRIMSKK PLAAGDLNSG DSGLLKGTTI IVPGPDGDGA RKGGCCFSST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	4e-94	bHLH family protein