PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP045022.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 321aa MW: 33496.6 Da PI: 7.3916

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP045022.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.2	1.8e-38	31	91	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++l+cprCdstntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s PCP045022.1 31 EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKRS 91 57889****************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MPSDSGDQQQ NNSQNRRTVK ATQATGAPPP EQEHLPCPRC DSTNTKFCYY NNYNFSQPRH 60 FCKSCRRYWT HGGTLRDIPV GGGTRKNAKR SRTAASAASV ATTTTTSDND PISATPFFLN 120 PGVGAALQLS DLKGNMGNGC GGGGGSGSFT SLLNTHGPGG FLALGGFGLG LAGGFEEMGF 180 GLGRAVWPFA GMGGDGVAGG THGGMMNMWQ LENGEGGGIV NVGVGPVGAE FCSWPELAIS 240 TPGNGLNYVR FNVKLQELKE LELTMADKLT TFPPDKALKG SGIQVILGTL NADVPTLAND 300 PAFANVWLQT NVILFASSVN L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50410.1	1e-36	Dof family protein