PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP044888.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NF-YA
Protein Properties Length: 355aa    MW: 39376.3 Da    PI: 9.8896
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP044888.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA821e-25205260158
    CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                  dep+YVNaKQy++Il++Rq Rakl++++kl +k  ++yl+eS h hA++R+RgsgGrF
  PCP044888.1 205 DEPIYVNAKQYRAILRKRQFRAKLKAQNKL-IK-VRKYLYESQHVHAMKRARGSGGRF 260
                  79****************************.55.567********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MQNWAKKNSC FGFAHSTFPF VVGSSSWEKS TGTHVQHPST STSLILKMGV PLYNYHNSKQ  60
SGINFQDQDS SSTHSTSQTL SGVNSMKEDN PCVQGIDSIQ SGIYVEGHMK SLSPMANQGF  120
NFPSQIDFSC SIVSCHLPVF FLVPNGGGNL MLFWLLIQGH IPFHSEPYIG SLLATASGPQ  180
DAIHHPQVLG ITPGRVPLPL DLTEDEPIYV NAKQYRAILR KRQFRAKLKA QNKLIKVRKY  240
LYESQHVHAM KRARGSGGRF LNKKKVKDSK PNTLNHRVNA SDVAIGNTVH EPNNYRDGAS  300
ITSCFEVTKT SNSGDKFPWX DFRFSGYPSH IGGTMQLPFV DLRSGGNQHH LSILQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.18e-52NF-YA family protein