PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP044783.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 285aa    MW: 32038.7 Da    PI: 7.0038
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP044783.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM104.71.2e-322810154128
          NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                  + kewyf+s+rd+kyatg r+nrat++gyWkatgkd+++l+ +g+lvg++ktLvfy+grapkg+k+dWvmhe+r+
  PCP044783.1  28 GGKEWYFYSQRDRKYATGLRTNRATATGYWKATGKDRPILR-RGSLVGMRKTLVFYQGRAPKGRKSDWVMHEFRV 101
                  679*************************************9.999****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MDDDESPPFS FLSPCAGYQE VFESACVGGK EWYFYSQRDR KYATGLRTNR ATATGYWKAT  60
GKDRPILRRG SLVGMRKTLV FYQGRAPKGR KSDWVMHEFR VEGPLGPPKI SSLKEDWALC  120
RVFYKNREIA AKPSMGISCY DDTSTSTLPA LMDSYISFDG QTQSQTQTQT QPQESEQVPC  180
FSMFSQNQNP FFTHTDITSS QPNIPTKHNN NNDTTTFGGL PNMTNFLDPF SCDKIVLKTV  240
LSHLTKMEST TYPTLNGSSP SFGEGSSSEN YLSDVGMPNN IWSHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.11e-85NAC family protein