PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044730.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

SBP

Protein Properties

Length: 499aa MW: 54526.9 Da PI: 8.5352

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044730.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	135.3	2e-42	156	231	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dls+ k+yh+rhkvCevhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCrrrLa+hnerrrk+q PCP044730.1 156 CQVYGCNKDLSSYKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLGEFDDGKRSCRRRLAGHNERRRKPQ 231 **************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MESWSCISEG KGFVVSDGTI SHTDSLSRSR NGLMGWELKT PCTFMESQGF GELGFPEMVG 60 KHLQSDSIRD AVSTSMSTPN LFFGEDKSSS RISSSIVDSS SRDCSLIDLK LGRLADHRDV 120 HSAKLSKGTP MLSSSGSSTP PKRMRVLGVY PRPAYCQVYG CNKDLSSYKD YHKRHKVCEV 180 HSKTAKVIVN GIEQRFCQQC SRFHLLGEFD DGKRSCRRRL AGHNERRRKP QIGSHPGRAG 240 RFPQSFDGGR FEGNMLTTAS FICQEILPTD IPEKYGTGDW CRHVKVEGGT HYRPLSGMPV 300 TNGHLHSKPV FPSYDIGKQY PSFHENGTNP LTASVFGQNG SQYPQDVRGL SSGSHSIFHG 360 IALGSQDFNV FNTTSAVPGL SGISDSGCAR SLLSSRSQNS SSYSSGIPFA RPLVIPASRK 420 FPSSGMNSGA RSHLSPILPS NDCDDTNDFG ISDEIIQGSG FANTKDRLPC QDGATIDLLQ 480 LSSQLQQVED QRQSMQAKQ

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MESWSCISEG KGFVVSDGTI SHTDSLSRSR NGLMGWELKT PCTFMESQGF GELGFPEMVG  60
KHLQSDSIRD AVSTSMSTPN LFFGEDKSSS RISSSIVDSS SRDCSLIDLK LGRLADHRDV  120
HSAKLSKGTP MLSSSGSSTP PKRMRVLGVY PRPAYCQVYG CNKDLSSYKD YHKRHKVCEV  180
HSKTAKVIVN GIEQRFCQQC SRFHLLGEFD DGKRSCRRRL AGHNERRRKP QIGSHPGRAG  240
RFPQSFDGGR FEGNMLTTAS FICQEILPTD IPEKYGTGDW CRHVKVEGGT HYRPLSGMPV  300
TNGHLHSKPV FPSYDIGKQY PSFHENGTNP LTASVFGQNG SQYPQDVRGL SSGSHSIFHG  360
IALGSQDFNV FNTTSAVPGL SGISDSGCAR SLLSSRSQNS SSYSSGIPFA RPLVIPASRK  420
FPSSGMNSGA RSHLSPILPS NDCDDTNDFG ISDEIIQGSG FANTKDRLPC QDGATIDLLQ  480
LSSQLQQVED QRQSMQAKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	1e-46	SBP family protein