PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044705.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 358aa MW: 40158.6 Da PI: 7.2138

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044705.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	17.6	6.6e-06	291	318	28	55
HHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 28 eereeLAkklgLterqVkvWFqNrRake 55 +++ LA+++gL+ +q+ +WF N+R ++ PCP044705.1 291 AQKLALAESTGLDLKQINNWFINQRKRH 318 67789********************885 PP
2	ELK	30.2	1e-10	212	233	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLl KYsgy g+LkqEF+ PCP044705.1 212 ELKVQLLGKYSGYMGTLKQEFM 233 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MKGGISRNSD SLGFLDSSLA AALMNSETRT TSSSSYSKQF LSLPLISNIP NLQSHPHETI 60 DQEMSVKAKI MAHPLFPQLL SAYVNCLKVG APAEVVARLQ QVCSAYNSEA AKRGSIRGGG 120 GDDHPDPALD QFMEAYCEML TKYEEELTKP FKEAMIFLSN IDAQLKALTL YSNSSSDSAS 180 ISSGDFVGQS GSPEEADAIK ECSMDPQAED RELKVQLLGK YSGYMGTLKQ EFMKKKKIGK 240 LPKEARHQLL DWWSRHYKWP YPSVQISYSS TSLQCKCKLR KGATIHHAVE AQKLALAEST 300 GLDLKQINNW FINQRKRHWK PSEDMQFVLM DPTLHHHHHD HQFYMDNAIC NPFSMDCS

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MKGGISRNSD SLGFLDSSLA AALMNSETRT TSSSSYSKQF LSLPLISNIP NLQSHPHETI  60
DQEMSVKAKI MAHPLFPQLL SAYVNCLKVG APAEVVARLQ QVCSAYNSEA AKRGSIRGGG  120
GDDHPDPALD QFMEAYCEML TKYEEELTKP FKEAMIFLSN IDAQLKALTL YSNSSSDSAS  180
ISSGDFVGQS GSPEEADAIK ECSMDPQAED RELKVQLLGK YSGYMGTLKQ EFMKKKKIGK  240
LPKEARHQLL DWWSRHYKWP YPSVQISYSS TSLQCKCKLR KGATIHHAVE AQKLALAEST  300
GLDLKQINNW FINQRKRHWK PSEDMQFVLM DPTLHHHHHD HQFYMDNAIC NPFSMDCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	5e-96	TALE family protein