PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044704.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

DBB

Protein Properties

Length: 297aa MW: 32777.2 Da PI: 4.7002

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044704.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22	3.5e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C +e H H++ PCP044704.1 4 QCDVCEKAPATVICCADEAALCAKCDVEVHAAnklaskHQR 44 7*****************************65667777765 PP
2	zf-B_box	27.5	6.7e-09	53	94	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + +kC+ +++k + +fC +++ l+C+dC + +H+ H PCP044704.1 53 KLPKCDICQDKTAFIFCVEDRALFCQDCDEPIHSAnslsanH 94 789******************************655666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MKIQCDVCEK APATVICCAD EAALCAKCDV EVHAANKLAS KHQRLLLQSL SNKLPKCDIC 60 QDKTAFIFCV EDRALFCQDC DEPIHSANSL SANHQRFLAT GIRVALASSS TKEAETSGLE 120 PPNQGAQKIS TKVSAPQASG ISSPWGVDDL LQLSDFESSD KNSLVLIEYV ETALKDAPEL 180 TLFLLKDWRN GRYHNIREIV CLFFHLSLTL RNSGLCFLQK DSLEFGELEW IADMGIFGDQ 240 FPQEAPAAAE VPQLPVPQSS NLTSYRPPKS SSPPKKPRIE IPDDDDEYFT VPDLGRF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.2	1e-71	DBB family protein