PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044534.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 397aa MW: 45495.6 Da PI: 9.7312

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044534.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.7	1.9e-31	81	134	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+++AtPk +l+lm+v gL+++hvkSHLQ+YR+ PCP044534.1 81 PRLRWTPQLHLSFVHAVERLGGQDRATPKLVLQLMNVRGLSISHVKSHLQMYRS 134 8****************************************************7 PP
2	Myb_DNA-binding	47.4	4.3e-15	82	133	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ + m+ g++ ++ks++q+y+ PCP044534.1 82 RLRWTPQLHLSFVHAVERLGGQdraTPKLVLQLMNvRGLSISHVKSHLQMYR 133 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MDELEFGYQE AEKSNEISEE QVENGSVGSS QKFSSFDLNE EASSDNEERG QGNKAADNDI 60 SSGGNEGQRV KVRQYVRSKM PRLRWTPQLH LSFVHAVERL GGQDRATPKL VLQLMNVRGL 120 SISHVKSHLQ MYRSKKLDGN GQVLSENHES KHGRDYISCM VHQTINQPRR HVYFRMDNGG 180 IVVATNPHDC HSQSQPDFKA SSRSSSLLNK EVAKGNNSNK SIDSILQTVP INPSKFPEEK 240 RWPPFETTNK QQWRAKRIPA AKINWSDNRN GSQSDHLMHH VHTTPRLIGE SYNLRPPNWH 300 LGESRNVRQF PSNAHNSITN SSCYKTEFKS PFRFELNAEK FSKYKEWMPQ LELGLGQRVE 360 NYEEKKITSR HRMVSEDHYG TGQRVKQEIS TKLALSL

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MDELEFGYQE AEKSNEISEE QVENGSVGSS QKFSSFDLNE EASSDNEERG QGNKAADNDI  60
SSGGNEGQRV KVRQYVRSKM PRLRWTPQLH LSFVHAVERL GGQDRATPKL VLQLMNVRGL  120
SISHVKSHLQ MYRSKKLDGN GQVLSENHES KHGRDYISCM VHQTINQPRR HVYFRMDNGG  180
IVVATNPHDC HSQSQPDFKA SSRSSSLLNK EVAKGNNSNK SIDSILQTVP INPSKFPEEK  240
RWPPFETTNK QQWRAKRIPA AKINWSDNRN GSQSDHLMHH VHTTPRLIGE SYNLRPPNWH  300
LGESRNVRQF PSNAHNSITN SSCYKTEFKS PFRFELNAEK FSKYKEWMPQ LELGLGQRVE  360
NYEEKKITSR HRMVSEDHYG TGQRVKQEIS TKLALSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-35	G2-like family protein