PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044527.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 936aa MW: 103290 Da PI: 6.53

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044527.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.3	3.4e-19	365	465	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++lv+ PCP044527.1 365 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPIRIQDVKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PGGRLVI 460 99************************555556677***********99899999999.*******************987.8999999 PP EEE-S CS B3 95 kvfrk 99 +++++ PCP044527.1 461 GFRKA 465 99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 936 aa Download sequence
MHVFSPGLTH TDPQKPHSPL ITFVNAHCIE RAAAVAGFGE LEFGGMESKI CMNPSCRMAN 60 THEWKKGWPL RTGGFAHLCY KCGVEYENSV YCNTFHSGET GWRDCNLCHK PLHCGCIVSE 120 ILYECLDFGG IGCIGCASQP RMIQDGDVLN GFGGLKISDS GDQQSTVPQN GALSDTANEG 180 KLLQLCQVME ANESNLSSQS QRGEIIVSPV QTKREEVTYP RGEVGPGFSS ISRPSFGSLT 240 FAKPDNGRIM IEVKDMNKPS SDPSLSMTLG GPSATPNFAQ PFTGGILERR DQIKTPSSFQ 300 QGQKIQPIFP RPLRPPPPVH HVRVARPPAE GRGKSQLLPR YWPRITDQEL QKLAGDLNST 360 IVPLFEKVLS ASDAGRIGRL VLPKACAEAY FPPISQSEGL PIRIQDVKGN EWTFQFRFWP 420 NNNSRMYVLE GVTPCIQSMQ LQAGDTVTFS RIDPGGRLVI GFRKASRCLD VQESQTSFLP 480 NGTPGETSCP SVVENLVTGS GHSSIYQTST GSKDPYLNAL SGHLHLADGD TSLHDNENHS 540 HFTSEDLQQK PVSNSDKKRA RNIGPKSKRL LLHSEDVLEL RLTWEEAQDL LRPPPSVKPS 600 IVTIEDHEFE EYDEPPVFGK RSLFIAESER QEQWAQCDDC SKWRRLPVDV LLPPKWTCSE 660 NSWDINRCSC SAPEEVSQKE LDNLLRPSKD LKKRRIVVNH NEAQEHEPSG LDALASASAA 720 ILGDSVDYAD EQSVGATTRH PRHRPGCTCI VCIQPPSGKG KHKPTCTCNV CMTVKRRFKT 780 LMMNKRKRKS EREMENAHRD NNDHKDESEM NGTSTEIELH MNHLSENGSS CEKRIQADVA 840 ESSCAGQIDL NCEPKHNYVQ VSGLNLLRLA DAVAQQPVKN STKESGLANR MYEPQAGLGS 900 SLRTQDTAET DKLLCNEGSL SSVAAAWDLE GRGDGD

Sequence ? help Back to Top

Protein Sequence Length: 936 aa Download sequence

MHVFSPGLTH TDPQKPHSPL ITFVNAHCIE RAAAVAGFGE LEFGGMESKI CMNPSCRMAN  60
THEWKKGWPL RTGGFAHLCY KCGVEYENSV YCNTFHSGET GWRDCNLCHK PLHCGCIVSE  120
ILYECLDFGG IGCIGCASQP RMIQDGDVLN GFGGLKISDS GDQQSTVPQN GALSDTANEG  180
KLLQLCQVME ANESNLSSQS QRGEIIVSPV QTKREEVTYP RGEVGPGFSS ISRPSFGSLT  240
FAKPDNGRIM IEVKDMNKPS SDPSLSMTLG GPSATPNFAQ PFTGGILERR DQIKTPSSFQ  300
QGQKIQPIFP RPLRPPPPVH HVRVARPPAE GRGKSQLLPR YWPRITDQEL QKLAGDLNST  360
IVPLFEKVLS ASDAGRIGRL VLPKACAEAY FPPISQSEGL PIRIQDVKGN EWTFQFRFWP  420
NNNSRMYVLE GVTPCIQSMQ LQAGDTVTFS RIDPGGRLVI GFRKASRCLD VQESQTSFLP  480
NGTPGETSCP SVVENLVTGS GHSSIYQTST GSKDPYLNAL SGHLHLADGD TSLHDNENHS  540
HFTSEDLQQK PVSNSDKKRA RNIGPKSKRL LLHSEDVLEL RLTWEEAQDL LRPPPSVKPS  600
IVTIEDHEFE EYDEPPVFGK RSLFIAESER QEQWAQCDDC SKWRRLPVDV LLPPKWTCSE  660
NSWDINRCSC SAPEEVSQKE LDNLLRPSKD LKKRRIVVNH NEAQEHEPSG LDALASASAA  720
ILGDSVDYAD EQSVGATTRH PRHRPGCTCI VCIQPPSGKG KHKPTCTCNV CMTVKRRFKT  780
LMMNKRKRKS EREMENAHRD NNDHKDESEM NGTSTEIELH MNHLSENGSS CEKRIQADVA  840
ESSCAGQIDL NCEPKHNYVQ VSGLNLLRLA DAVAQQPVKN STKESGLANR MYEPQAGLGS  900
SLRTQDTAET DKLLCNEGSL SSVAAAWDLE GRGDGD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	775	789	KRRFKTLMMNKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein