PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044509.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 541aa MW: 59886.1 Da PI: 7.781

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044509.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	94.7	1.5e-29	337	443	28	128
NAM 28 leleevikevdiykvePwdLp.k.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgekt 119 +++ + ++v y + P++ + k+++ ++wyfF++rd+ky++g+r++ra+ +gyWkatg d+ev+s +g++vg +k Lvfy+g+ p+g kt PCP044509.1 337 ASVTIITQQVASYILSPNKQSpAqggqeKYEKYGDRWYFFTPRDRKYRNGSRPKRAAGDGYWKATGADREVKSFDGAVVGSRKALVFYRGKPPRGDKT 434 334334666778888888774334555455555669************************************************************ PP NAM 120 dWvmheyrl 128 +W+mhe+++ PCP044509.1 435 NWIMHEFKV 443 *****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MSSGAGKVVC VTGASGYIAS WLVKLLLQRG YTVKASIRDP NDPTKTEHLH ALDGAQDRLQ 60 LFKANLLEEG SFDSAVEGCE AVFHTASPFY HDVTDPKAEL LEPAVKGTLN VLNSCAKSPS 120 IKRVVLTSSI AAVAYNGKPR TPDVVIDETW FTDPDVCKES KLWYVLSKTL AEDAAWKFVK 180 EKGIDLVTIN PAMVIGPLLQ PTLNTSAAAV LNVIKGARTF PNASFGWINV KDVATAHIQA 240 FESPTASGRY CLVETVAHFS EVVRILRELY PTLQLPEKCA DDKPFVPTYQ VSKEKAKSLG 300 VEFIPLDVSL KETVESLKEK ESPTMELVEQ SHPDHKASVT IITQQVASYI LSPNKQSPAQ 360 GGQEKYEKYG DRWYFFTPRD RKYRNGSRPK RAAGDGYWKA TGADREVKSF DGAVVGSRKA 420 LVFYRGKPPR GDKTNWIMHE FKVKDSPVRS RRGENDMRSV EAASVNAGSC YANMGYSQPI 480 CVRPPLMSSE SVLGPYRYID ESTILQDDMM FGMKGFEHSL YSTNNYAGQF SALDHVFPYT 540 E

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MSSGAGKVVC VTGASGYIAS WLVKLLLQRG YTVKASIRDP NDPTKTEHLH ALDGAQDRLQ  60
LFKANLLEEG SFDSAVEGCE AVFHTASPFY HDVTDPKAEL LEPAVKGTLN VLNSCAKSPS  120
IKRVVLTSSI AAVAYNGKPR TPDVVIDETW FTDPDVCKES KLWYVLSKTL AEDAAWKFVK  180
EKGIDLVTIN PAMVIGPLLQ PTLNTSAAAV LNVIKGARTF PNASFGWINV KDVATAHIQA  240
FESPTASGRY CLVETVAHFS EVVRILRELY PTLQLPEKCA DDKPFVPTYQ VSKEKAKSLG  300
VEFIPLDVSL KETVESLKEK ESPTMELVEQ SHPDHKASVT IITQQVASYI LSPNKQSPAQ  360
GGQEKYEKYG DRWYFFTPRD RKYRNGSRPK RAAGDGYWKA TGADREVKSF DGAVVGSRKA  420
LVFYRGKPPR GDKTNWIMHE FKVKDSPVRS RRGENDMRSV EAASVNAGSC YANMGYSQPI  480
CVRPPLMSSE SVLGPYRYID ESTILQDDMM FGMKGFEHSL YSTNNYAGQF SALDHVFPYT  540
E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	4e-30	NAC family protein