PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044419.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

E2F/DP

Protein Properties

Length: 462aa MW: 51070.5 Da PI: 6.084

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044419.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.7	1.7e-27	198	281	2	71
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse.................dvknkrRRiYDilNVLealnliekkekneirwkg 71 ++++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg PCP044419.1 198 NGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpsnavtspdqqqqdDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 281 789******...*999****************************************************.*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MWKSQESERR LRDPIEEGRR DRRDVVYSSP VPPRPNLPAT GVPGTSPGFA SRIFGGFDGP 60 LPPVEVADPA IDMIKEFTPS FGLPGLIQAP LINSPINTRF QWCAVVGIGM GTRSQQQPGR 120 ERVGQDDDDM AGGQSVSMSG SVGSPSSRSE QTMATPVGDN SFLRLNHPDV HGDDAGSQGA 180 VGSKKKKRGQ RAVAGDKNGR GLRQFSMKVC EKVESKGRTT YNEVADELVA EFADPSNAVT 240 SPDQQQQDDE KNIRRRVYDA LNVLMAMDII SKDKKEIQWK GLPRTSLNDI EELKTERMGL 300 RNRIEKKAAY LQELEEQYVG LQNLIQRNEQ LYHSGDAPSG GVALPFILVQ ASFLLKTRPH 360 ATVEVEISED MQLVHFDFNS TPFELHDDNY VLKAMKFCNR QQGDDATQNL IVDGGEGCSM 420 SDMYQPQIPL SSMLNTPIRP PPMSPPLPGI LKARVKHEHH GQ

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MWKSQESERR LRDPIEEGRR DRRDVVYSSP VPPRPNLPAT GVPGTSPGFA SRIFGGFDGP  60
LPPVEVADPA IDMIKEFTPS FGLPGLIQAP LINSPINTRF QWCAVVGIGM GTRSQQQPGR  120
ERVGQDDDDM AGGQSVSMSG SVGSPSSRSE QTMATPVGDN SFLRLNHPDV HGDDAGSQGA  180
VGSKKKKRGQ RAVAGDKNGR GLRQFSMKVC EKVESKGRTT YNEVADELVA EFADPSNAVT  240
SPDQQQQDDE KNIRRRVYDA LNVLMAMDII SKDKKEIQWK GLPRTSLNDI EELKTERMGL  300
RNRIEKKAAY LQELEEQYVG LQNLIQRNEQ LYHSGDAPSG GVALPFILVQ ASFLLKTRPH  360
ATVEVEISED MQLVHFDFNS TPFELHDDNY VLKAMKFCNR QQGDDATQNL IVDGGEGCSM  420
SDMYQPQIPL SSMLNTPIRP PPMSPPLPGI LKARVKHEHH GQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03415.1	1e-141	E2F/DP family protein