PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP044410.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | GATA | ||||||||
Protein Properties | Length: 508aa MW: 55706 Da PI: 6.2522 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 48.1 | 1.6e-15 | 159 | 194 | 1 | 34 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 C +Cg ++ Tp++Rrgp+g+++LCnaCGl+++ +g PCP044410.1 159 CKHCGISSksTPMMRRGPSGPRSLCNACGLFWANRG 194 *****99999**********************9987 PP | |||||||
2 | GATA | 49.1 | 7.8e-16 | 400 | 436 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+++ Tp +Rrgp g++tLCnaCGl+++ kg+ PCP044410.1 400 CQHCGVSEnnTPAMRRGPAGPRTLCNACGLMWANKGT 436 *******99*************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 508 aa Download sequence |
MTMPNPIPAC DDDDAGAADS IDNAHIQYDS HTLEDGGIVV VEDVSSDGVY VQAVLLLLGG 60 NELSPNAQGT ELASQNQRAT EDYPRCSQPH RAASLFRFRQ KRKERCFDKK VRYGVRQEVA 120 LRMQRNKGQF SSSKRSDGDS NWSAGQESGQ EDCHAETSCK HCGISSKSTP MMRRGPSGPR 180 SLCNACGLFW ANRGGLRELS KRSHDIKRIE QGGEPDTKDL DSVTAIDAHD NLVPFSNGDN 240 SALPLQARPI EEHGRAPIQV EDDDGDYEDG GDDGMEDMEE VHVNSVQAVL LLLGGRDIPT 300 GVPTVEVSSD QNTRGVGGTS KRSNLSRRIA SLVRFREKRK ERCFDKKIRY TVRKEVAQRM 360 LRKNGQFASL KQTSGASSWE STQSCLQDGT PQPETLLRRC QHCGVSENNT PAMRRGPAGP 420 RTLCNACGLM WANKGTLRDL SKSGRNLTVD HIEPGMPIEA KPVIVEGEIS RNQDEHGTLG 480 GLLKKVDEGS NDASVNPDEE VCFAFKVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24470.2 | 3e-69 | GATA family protein |