PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP044410.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 508aa    MW: 55706 Da    PI: 6.2522
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP044410.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.11.6e-15159194134
         GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                  C +Cg ++  Tp++Rrgp+g+++LCnaCGl+++ +g
  PCP044410.1 159 CKHCGISSksTPMMRRGPSGPRSLCNACGLFWANRG 194
                  *****99999**********************9987 PP

2GATA49.17.8e-16400436135
         GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C++Cg+++  Tp +Rrgp g++tLCnaCGl+++ kg+
  PCP044410.1 400 CQHCGVSEnnTPAMRRGPAGPRTLCNACGLMWANKGT 436
                  *******99*************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 508 aa     Download sequence    
MTMPNPIPAC DDDDAGAADS IDNAHIQYDS HTLEDGGIVV VEDVSSDGVY VQAVLLLLGG  60
NELSPNAQGT ELASQNQRAT EDYPRCSQPH RAASLFRFRQ KRKERCFDKK VRYGVRQEVA  120
LRMQRNKGQF SSSKRSDGDS NWSAGQESGQ EDCHAETSCK HCGISSKSTP MMRRGPSGPR  180
SLCNACGLFW ANRGGLRELS KRSHDIKRIE QGGEPDTKDL DSVTAIDAHD NLVPFSNGDN  240
SALPLQARPI EEHGRAPIQV EDDDGDYEDG GDDGMEDMEE VHVNSVQAVL LLLGGRDIPT  300
GVPTVEVSSD QNTRGVGGTS KRSNLSRRIA SLVRFREKRK ERCFDKKIRY TVRKEVAQRM  360
LRKNGQFASL KQTSGASSWE STQSCLQDGT PQPETLLRRC QHCGVSENNT PAMRRGPAGP  420
RTLCNACGLM WANKGTLRDL SKSGRNLTVD HIEPGMPIEA KPVIVEGEIS RNQDEHGTLG  480
GLLKKVDEGS NDASVNPDEE VCFAFKVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.23e-69GATA family protein