PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP044325.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 253aa    MW: 26841.6 Da    PI: 6.3847
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP044325.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.12.2e-392989262
       zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                 +++ l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWt+GG+lrnvPvGgg+rkn k+s
  PCP044325.1 29 QTEPLHCPRCDSDNTKFCYYNNYNLAQPRHFCKSCRRYWTHGGTLRNVPVGGGSRKNTKRS 89
                 57889****************************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MPFDSADAQM QPSTTMRVQH SLGHPPPQQT EPLHCPRCDS DNTKFCYYNN YNLAQPRHFC  60
KSCRRYWTHG GTLRNVPVGG GSRKNTKRSR PSCSSSSGSP SSSSLTQEVS SVAPTKAISV  120
PVEPKPETAL DHEKLMDLNE SAVGNGGFTS LLSAQGPPAP GFLALGGFGY GFGYGLGLGQ  180
GLDEVGTFGY GGGRGVLAFP EEGDFANINH NNNGAVSGGS VGYNTWQIMT GGDGRIAEDN  240
GDCFTWPELE ISK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66940.15e-33Dof family protein