PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044216.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 940aa MW: 104898 Da PI: 7.1695

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044216.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.5	4.6e-31	643	696	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 rlrWtp+LH +Fv+ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+ PCP044216.1 643 SRLRWTPDLHLCFVRAVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 696 69***************************************************7 PP
2	Myb_DNA-binding	49.7	8.8e-16	644	695	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ + m+ kg++ ++ks++q+y+ PCP044216.1 644 RLRWTPDLHLCFVRAVERLGGQeraTPKLVLQLMNvKGLSIAHVKSHLQMYR 695 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 940 aa Download sequence
MEKSDSETQN PKDDRDEEPH SNVNGTVDGD LEPDEIDDEI DEEEDEDDDE EPPLPRKPLS 60 QEARLRAEKS KLESLVQRMS TERVDLRVHD VLIKGNTKTK EHLIEAELAG IKKATTMQEL 120 LEAAAIANAK LQQLEIFDAV RITLDSGPPE LPGTTNVIVE VVETKSPISG EIGAYTKPAA 180 RSWTAEGTLK FKNLLGYGDL WDSSLAYGPN QTSELSAGLF LPRFKGFVTP VTARAFLLSQ 240 DWVEFSSYKE RMMGLSLGLI SSKHHDLAYN LGWRTLADPS QLASRSIRRQ LGHGLLSSIK 300 YTFKNDRRNS PLRPTRGYSF VSTSHIGGIA PDHRSTRFLR QEFDLRYAVP LGFYHAALNF 360 GISAGVIFPW GSGFLNKPSS LPERFFLGGD FSPVCTVGGP TTVWGFKTRG LGPTEPRRHV 420 GDNSNEENSE SPGRDSVGGD LAVSAFADIS FDLPLRWLKQ HGVHGHIFAG AGNLAKLTEN 480 EFRNFSAPKF LQSFRSSVGA GIVVPTKFFR LEEAWCFDDA HKKKNNMRFP VLEHINTVIK 540 TVEKILKLSI FSNEYFHTHL FPSRLGMKSE STSIEEVSKS SPSTSKKEYY HEDDKGEEDE 600 VDEDGLRLRN NGDSSSNSTI EENHEKKGAS GSVRQYYVRS KTSRLRWTPD LHLCFVRAVE 660 RLGGQERATP KLVLQLMNVK GLSIAHVKSH LQMYRSKKTE DPNQVLTDQA GFFMEGGDNQ 720 LYNLTQLSML QSFNRWPSSG LRYGANGHSS WRGRHHQIYS PYSSSRTTAL LDHNTRNIGL 780 YGSVAERILG SNNNNIMTTS ANQLYTNLPS PTHGQTTWRR NRDELCQTMI HRSCQDHHSW 840 TAAIRDHQGQ NMLKRKDLDT DNCDLDLNLS LKVPPKHDHG FGKGLQCGGD NHQKLLMGCS 900 LSLTLSSSSS SKLGVKKLEG TGHGDGKHGK NMASTLDLTL

Sequence ? help Back to Top

Protein Sequence Length: 940 aa Download sequence

MEKSDSETQN PKDDRDEEPH SNVNGTVDGD LEPDEIDDEI DEEEDEDDDE EPPLPRKPLS  60
QEARLRAEKS KLESLVQRMS TERVDLRVHD VLIKGNTKTK EHLIEAELAG IKKATTMQEL  120
LEAAAIANAK LQQLEIFDAV RITLDSGPPE LPGTTNVIVE VVETKSPISG EIGAYTKPAA  180
RSWTAEGTLK FKNLLGYGDL WDSSLAYGPN QTSELSAGLF LPRFKGFVTP VTARAFLLSQ  240
DWVEFSSYKE RMMGLSLGLI SSKHHDLAYN LGWRTLADPS QLASRSIRRQ LGHGLLSSIK  300
YTFKNDRRNS PLRPTRGYSF VSTSHIGGIA PDHRSTRFLR QEFDLRYAVP LGFYHAALNF  360
GISAGVIFPW GSGFLNKPSS LPERFFLGGD FSPVCTVGGP TTVWGFKTRG LGPTEPRRHV  420
GDNSNEENSE SPGRDSVGGD LAVSAFADIS FDLPLRWLKQ HGVHGHIFAG AGNLAKLTEN  480
EFRNFSAPKF LQSFRSSVGA GIVVPTKFFR LEEAWCFDDA HKKKNNMRFP VLEHINTVIK  540
TVEKILKLSI FSNEYFHTHL FPSRLGMKSE STSIEEVSKS SPSTSKKEYY HEDDKGEEDE  600
VDEDGLRLRN NGDSSSNSTI EENHEKKGAS GSVRQYYVRS KTSRLRWTPD LHLCFVRAVE  660
RLGGQERATP KLVLQLMNVK GLSIAHVKSH LQMYRSKKTE DPNQVLTDQA GFFMEGGDNQ  720
LYNLTQLSML QSFNRWPSSG LRYGANGHSS WRGRHHQIYS PYSSSRTTAL LDHNTRNIGL  780
YGSVAERILG SNNNNIMTTS ANQLYTNLPS PTHGQTTWRR NRDELCQTMI HRSCQDHHSW  840
TAAIRDHQGQ NMLKRKDLDT DNCDLDLNLS LKVPPKHDHG FGKGLQCGGD NHQKLLMGCS  900
LSLTLSSSSS SKLGVKKLEG TGHGDGKHGK NMASTLDLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	6e-42	G2-like family protein