PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP044035.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NF-YB | ||||||||
Protein Properties | Length: 157aa MW: 17392.2 Da PI: 5.3033 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 165.9 | 5.1e-52 | 23 | 118 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqd++lPianv+rimk++lP nakisk+aket+qec+sefisfvt+eas+kc++e+rkt+ngdd++wal+ lGf+dy pl+ yl++yre e+++ PCP044035.1 23 KEQDQLLPIANVGRIMKQILPPNAKISKEAKETMQECASEFISFVTGEASEKCRKERRKTVNGDDVCWALGALGFDDYTGPLRRYLHRYREQERDR 118 89*******************************************************************************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
MVDNNNPGAS GAAKDDDIDG GIKEQDQLLP IANVGRIMKQ ILPPNAKISK EAKETMQECA 60 SEFISFVTGE ASEKCRKERR KTVNGDDVCW ALGALGFDDY TGPLRRYLHR YREQERDRIS 120 SEANNNINED HQGISINNIP HTQGSNYFKG SSTSGCN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 1e-53 | NF-YB family protein |