PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP043995.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 285aa    MW: 32160.1 Da    PI: 7.8243
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP043995.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM103.52.7e-322810254129
          NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                  ++kewyf+s+rd+kyatg r+nrat++gyWkatgkd+++ + kg lvg++ktLvfy+grapkg+k+dWvmhe+rle
  PCP043995.1  28 GRKEWYFYSQRDRKYATGLRTNRATATGYWKATGKDRSIRR-KGILVGMRKTLVFYQGRAPKGTKSDWVMHEFRLE 102
                  678*************************************9.999****************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MGDDESPPFS ILSPCSGYQE VFESACVGRK EWYFYSQRDR KYATGLRTNR ATATGYWKAT  60
GKDRSIRRKG ILVGMRKTLV FYQGRAPKGT KSDWVMHEFR LEGPLSPPKI SPLKEDWVLC  120
RVLYKNREIA AKPSMGISCY DDTSTLTLPA LMDSYISFDG QTQTQTHTET QPQEYEQVPC  180
FSMFSQNQTN PIFTHTDITS SQPNIPTKHN NNTNTTTFGG LPNVTNFLDP FSCDKKVLKA  240
ILSHLTKMES TTYPTLDGSS PSFGEGSTEN YLSDVGMPNN IWSHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.17e-88NAC family protein