PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP043441.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | GATA | ||||||||
Protein Properties | Length: 541aa MW: 60032.6 Da PI: 7.5802 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 49.8 | 4.5e-16 | 7 | 41 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+ PCP043441.1 7 CYHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGT 41 ****************55555***********997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 541 aa Download sequence |
MGKQGPCYHC GVTSTPLWRN GPPDKPVLCN ACGSRWRTKG TLINYTPLHA RAEPDDIEDH 60 RVSRVKSISV NKNKEIKLVK RKQNPESMVI GGVNSDYSHG FRKIIEEDKS NRSSSGSAVS 120 NSESCAQFGS GDASDLTGPA QSMVWDSMVP SRKRTCIGRL KPSPVEKLTK DLYTILHEQQ 180 SSCFSGSSEE DLLFESETPM VSVEIGHGSV LIRHPNSIAR EEESEASSIS VDNKQCLANE 240 VYSRSATLFV HNNKGVNMAS TVSGRMNNVA GQGMQHEPLK RDKSQLDNFQ ILGNHNSPLR 300 HVDLNDILTF EEFTRQLTNE EQQQLLKHLP PVDVVKFPYS LKSMFDSPQF RENFTSFQQL 360 LAEGVFDISF PGVKTEDCKT LKRLALSNSP KSKWVERYHL LKKCKTSSGK SVVSGLNMAS 420 SNLRHVKRLW DNETQSFPDA KIMKSPKRII MKGSYENKDP MDYDGGSCFS PKSLFALPTD 480 GGSFLMDSMN FVDESSDQDL LLDVPSNGSF AQAELLHPAM SFGAPQASTS SSSIYPHVLH 540 P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17570.3 | 1e-161 | GATA family protein |