PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP043441.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 541aa    MW: 60032.6 Da    PI: 7.5802
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP043441.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.84.5e-16741135
         GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                 C +Cg+t+TplWR+gp  ++ LCnaCG ++r kg+
  PCP043441.1  7 CYHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGT 41
                 ****************55555***********997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    
MGKQGPCYHC GVTSTPLWRN GPPDKPVLCN ACGSRWRTKG TLINYTPLHA RAEPDDIEDH  60
RVSRVKSISV NKNKEIKLVK RKQNPESMVI GGVNSDYSHG FRKIIEEDKS NRSSSGSAVS  120
NSESCAQFGS GDASDLTGPA QSMVWDSMVP SRKRTCIGRL KPSPVEKLTK DLYTILHEQQ  180
SSCFSGSSEE DLLFESETPM VSVEIGHGSV LIRHPNSIAR EEESEASSIS VDNKQCLANE  240
VYSRSATLFV HNNKGVNMAS TVSGRMNNVA GQGMQHEPLK RDKSQLDNFQ ILGNHNSPLR  300
HVDLNDILTF EEFTRQLTNE EQQQLLKHLP PVDVVKFPYS LKSMFDSPQF RENFTSFQQL  360
LAEGVFDISF PGVKTEDCKT LKRLALSNSP KSKWVERYHL LKKCKTSSGK SVVSGLNMAS  420
SNLRHVKRLW DNETQSFPDA KIMKSPKRII MKGSYENKDP MDYDGGSCFS PKSLFALPTD  480
GGSFLMDSMN FVDESSDQDL LLDVPSNGSF AQAELLHPAM SFGAPQASTS SSSIYPHVLH  540
P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.31e-161GATA family protein