PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP043372.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 247aa MW: 27579.6 Da PI: 10.1441 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 64 | 4.6e-20 | 11 | 136 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkk.vegkkleleevikevdiy.kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 p G+rFhPtd+elv yL+ + ++gk+l + +i e +++ ++ Pw + +++ + +++++fF + ++ +g+r++r + + g+W+ t +dk + PCP043372.1 11 PLGCRFHPTDQELVASYLRVRaLAGKPLGI-PFIYEYNLFgQTPPWVIWENLGGnslLDQDLFFFYELRS---SGSRSKRqIEAGGTWSGTSSDKVLG 104 78****************988255566666.779999877267889996533332224567888888766...4778888455589*******99888 PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+++g k+ + + ++ ++ ++ dW+++ey+l PCP043372.1 105 L-DGNQIGEKRHFKYTNKGSE--NNGDWLLEEYSL 136 8.999**********944333..478*******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MRMPLGYWGA PLGCRFHPTD QELVASYLRV RALAGKPLGI PFIYEYNLFG QTPPWVIWEN 60 LGGNSLLDQD LFFFYELRSS GSRSKRQIEA GGTWSGTSSD KVLGLDGNQI GEKRHFKYTN 120 KGSENNGDWL LEEYSLLPSA VAGAKVVLSR LKRNPRSRCG IKMDSSVPTP EFNEKPPVKR 180 AGKQVVNEKP PVKRKRARTE ELNEKPSVKE EKKEVGSQTN TSASVVPPLL NYKTALVQAV 240 VLMKEIG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 5e-14 | NAC family protein |