PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP043196.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 375aa MW: 42484.1 Da PI: 7.3502

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP043196.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.9	2e-53	11	141	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+evd++k+ePwdL++ ++ + +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++ + PCP043196.1 11 VPPGFRFHPTDEELLYYYLRKKVSYEAIDL-DVIREVDLNKLEPWDLKEkcRIGSgPQNDWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIHLT 107 69**************************.9***********952444443456*********************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++ +g++ktLvfy+grap+g+ktdW+mheyrle PCP043196.1 108 SSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLE 141 ******************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MMAAGNGQLT VPPGFRFHPT DEELLYYYLR KKVSYEAIDL DVIREVDLNK LEPWDLKEKC 60 RIGSGPQNDW YFFSHKDKKY PTGTRTNRAT TAGFWKATGR DKAIHLTSSK RIGMRKTLVF 120 YTGRAPHGQK TDWIMHEYRL EDDNITADQV QQEDGWVVCR VFKKKNHNRG YQPEFAHHQD 180 HQDHQDHDHF TNMKASGSHV PILLDHHDYH QQKQNHHHLE GLYDYPGSFD HAGSMHLPQL 240 FSPESAVAAS SFVSPHNINL NTMDIQCSQN LLRLTSAAAA AAAAASGSCG LVQQQERSFI 300 SGGDWSFLDK VLASHQSLDI NHSTSQTKCN PSSSTQQLSN SHGHDHDHVG TSSSTQQRFP 360 FQYLGCGTDL LKFSK

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MMAAGNGQLT VPPGFRFHPT DEELLYYYLR KKVSYEAIDL DVIREVDLNK LEPWDLKEKC  60
RIGSGPQNDW YFFSHKDKKY PTGTRTNRAT TAGFWKATGR DKAIHLTSSK RIGMRKTLVF  120
YTGRAPHGQK TDWIMHEYRL EDDNITADQV QQEDGWVVCR VFKKKNHNRG YQPEFAHHQD  180
HQDHQDHDHF TNMKASGSHV PILLDHHDYH QQKQNHHHLE GLYDYPGSFD HAGSMHLPQL  240
FSPESAVAAS SFVSPHNINL NTMDIQCSQN LLRLTSAAAA AAAAASGSCG LVQQQERSFI  300
SGGDWSFLDK VLASHQSLDI NHSTSQTKCN PSSSTQQLSN SHGHDHDHVG TSSSTQQRFP  360
FQYLGCGTDL LKFSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79580.1	1e-118	NAC family protein