PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP043106.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 383aa    MW: 43438.7 Da    PI: 4.8861
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP043106.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM61.92.1e-19251581128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiy.kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgk 88 
                  +p GfrFhPtd+el++++L ++  +++     ++ ++ i e+d++ k+ Pw   +++ +   e++++yfF++ +++++   r +r + + g+W+++ +
  PCP043106.1  25 MPLGFRFHPTDQELISFFLYNRFFHREslmadCNNFNLIYEFDLFgKTPPWVVWENFGGpglEDQDLYFFCQLKTRSQ--ARIKReIDAGGTWSESNS 120
                  699*******************9999878876566678****9873678899865443344488999*****988764..688884566899*98766 PP

          NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   k+v++  ++++ g k+ L + k  +   +  dW+++ey++
  PCP043106.1 121 -KPVKDLqNEKTLGKKRNLRYEK--EGCEHDGDWLLEEYSI 158
                  .66665438889********984..4444589*******85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MEEEGYGGNV PLGYYENPLL GSNGMPLGFR FHPTDQELIS FFLYNRFFHR ESLMADCNNF  60
NLIYEFDLFG KTPPWVVWEN FGGPGLEDQD LYFFCQLKTR SQARIKREID AGGTWSESNS  120
KPVKDLQNEK TLGKKRNLRY EKEGCEHDGD WLLEEYSILP SVVAGADDSD HEIGKVVLCR  180
LKKNSRSGNK KNCSNSTQQV NEQPAKKRAR KEVKEKPAKK KARKEVKQRP AKKKARNEVG  240
SQNTTSVITH TVEELQNCPS TSSAPVVPFD ESNYKMISDA INHDQQCISN IDGSTMPTNF  300
SDHDYVPVSF ASECGEFLLK DEDFLLKNGE DMFFDLDDLL PPLDCGSAWS LEKLPQIDGT  360
QEPLPLDGLS CWNDCLWMGN CVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.12e-13NAC family protein