PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP043011.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 288aa    MW: 31332.9 Da    PI: 5.5489
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP043011.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA443.1e-14247273127
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCG 27 
                  Cs+Cg+ kTp+WR gp+g ktLCnaCG
  PCP043011.1 247 CSHCGVQKTPQWRTGPNGAKTLCNACG 273
                  **************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MECVEAALKT SIRKEMAVKA NGPQAVVFDD LLWGGAVVNG QNACDDFSVD DLLDFSNENG  60
FFETEGEEED DKEKFKPFVS LSPQKQNQES EKSNLSEKIE PASELSVPAD DLVNLEWLSH  120
FVEDSFSEFA TALPAGFVPE NPKSEKRPDP ETAIPEKPCF KTPVPAKARS KRTRTGGRVW  180
SLGSPSLTES SSSSSSSSSS SPSNPWLIYP ATQNQEPGEP VLSVEKPPKK PKRRLVDGSS  240
SQPPRRCSHC GVQKTPQWRT GPNGAKTLCN ACGRCGGRRK ARAPPNPV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1228234PKKPKRR
2228235PKKPKRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.23e-43GATA family protein