PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP042869.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 327aa    MW: 36796.1 Da    PI: 4.5739
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP042869.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM58.32.6e-1881462128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkk....leleevikevdi..ykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk 88 
                  p Gf+F+Ptd+el++++L+  + +++     + +++i+e+++  +++eP+++ +     ++ +++ +yfFs+ +k ++ g++  r + + g+W+    
  PCP042869.1   8 PCGFHFKPTDQELIHRFLRDFLMNREplllPPYNTIIHECNLfgNRSEPSEIWEayegGAQRTDQALYFFSELKKLNPMGSHIDRkIGSGGTWNIGKA 105
                  89*******************999998997667678****9833478*****742444344456688******************4455789*95544 PP

          NAM  89 dkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    + ++    + + +glk+t+ + +  + +  + +W+++ey+l
  PCP042869.1 106 VATWVNGtdgNPSPIGLKRTFCYKN--EGSEDNGRWLLDEYSL 146
                  44444434545556********984..3333578*******87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MANHSLVPCG FHFKPTDQEL IHRFLRDFLM NREPLLLPPY NTIIHECNLF GNRSEPSEIW  60
EAYEGGAQRT DQALYFFSEL KKLNPMGSHI DRKIGSGGTW NIGKAVATWV NGTDGNPSPI  120
GLKRTFCYKN EGSEDNGRWL LDEYSLFASP RKNYRDSRYD FDYVLCRLRK DGSPGINKRK  180
CSTSEDQATS SKKKCADEKI EKDDDHEGSK QIVNAINAVE EEGPQGTSCL TNDLVAFDHD  240
QINEFTVGYD VAAYDYDIDP KVAEKMTINV AKLEEPEELL GQEFQEVPLP TASGVVVADG  300
EQTLNSSMLE ELIKETQELP LPACRIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.11e-11NAC family protein