PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP042779.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | GATA | ||||||||
Protein Properties | Length: 126aa MW: 14103.5 Da PI: 10.4472 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 29.1 | 1.4e-09 | 22 | 42 | 1 | 22 |
GATA 1 CsnCgttkTplWRrgpdgnktL 22 C+ C++t+TplWR+gp g+k L PCP042779.1 22 CTDCKATETPLWRSGPAGPK-L 42 ******************98.5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence |
MNLRRKVIQD MNVKNVKNKK CCTDCKATET PLWRSGPAGP KLNEQKPSHC AMPVGSDTER 60 KFLLGGRTDL SESLQVKLVA FGKDVCLQGT PPVQKKRRYQ KRRREMGEVE QAAVCLLAMS 120 SHSVFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06740.1 | 4e-11 | GATA family protein |