PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP042221.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 439aa MW: 48521.6 Da PI: 6.5514

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP042221.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.4e-09	362	399	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gL+++qV++WF N R + PCP042221.1 362 FEHflHPYPNDNEKLLLASQTGLSKNQVSNWFINARVR 399 564459******************************88 PP
2	BELL	98.5	5.3e-32	225	295	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 ++e+q++ a L++lle+V++r ++y++q+++v+ssFe+v+g g+ak+Yt+lAlka+SrhF +L+d i+++i PCP042221.1 225 KHEMQARLANLITLLEQVEDRCEKYYHQMEQVMSSFEMVVGEGAAKSYTALALKAMSRHFCSLRDGIVSHI 295 79******************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MVSQDSPPNP SSSIFHQFII SDSISAQNHH LESQHLDAYP PAFQTSTTFP QALGVLPSIH 60 SLGERMSRSV GLVQAPTGTA MENQVQRLSL SLGSHLLVPS GQYRHHNFHT GEESGEACNR 120 GVEHVGDEYC FMGGTLASHS SALNRSCSTS YGAESLAAVI ANSKYLKPAQ SLLEEIVNVG 180 GQLVDISNEK HVGKLYGEGR RGGMGLSSEL RAELSCNGGL MNADKHEMQA RLANLITLLE 240 QVEDRCEKYY HQMEQVMSSF EMVVGEGAAK SYTALALKAM SRHFCSLRDG IVSHIYAEKR 300 KLLQDVPKIS SGLSQLNLFD RECRHKRMSL QQLGIFQSQR QAFRPIRGLP ETSVAILRTW 360 LFEHFLHPYP NDNEKLLLAS QTGLSKNQVS NWFINARVRL WKPMIEEMYK EELGESSEDS 420 NSLAGGSLTG EGNTDPTEN

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MVSQDSPPNP SSSIFHQFII SDSISAQNHH LESQHLDAYP PAFQTSTTFP QALGVLPSIH  60
SLGERMSRSV GLVQAPTGTA MENQVQRLSL SLGSHLLVPS GQYRHHNFHT GEESGEACNR  120
GVEHVGDEYC FMGGTLASHS SALNRSCSTS YGAESLAAVI ANSKYLKPAQ SLLEEIVNVG  180
GQLVDISNEK HVGKLYGEGR RGGMGLSSEL RAELSCNGGL MNADKHEMQA RLANLITLLE  240
QVEDRCEKYY HQMEQVMSSF EMVVGEGAAK SYTALALKAM SRHFCSLRDG IVSHIYAEKR  300
KLLQDVPKIS SGLSQLNLFD RECRHKRMSL QQLGIFQSQR QAFRPIRGLP ETSVAILRTW  360
LFEHFLHPYP NDNEKLLLAS QTGLSKNQVS NWFINARVRL WKPMIEEMYK EELGESSEDS  420
NSLAGGSLTG EGNTDPTEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75430.1	1e-103	TALE family protein