PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP042051.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 139aa MW: 16398.7 Da PI: 6.0022 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 36.1 | 2e-11 | 28 | 74 | 1 | 48 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 lppG+rF td+el+ +yL +k +++l++ + + +v+iy+++P++L PCP042051.1 28 LPPGYRFVLTDDELILHYLMRKFMNEQLPI-NRFLNVNIYQHHPRELT 74 79****************************.67999***********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MEENNQFNNN MVPVLNEVGS VDAHIDSLPP GYRFVLTDDE LILHYLMRKF MNEQLPINRF 60 LNVNIYQHHP RELTGIQREG TMTDWKMHEY KLTNETDPPK KIDGTDMKLN DCVLCKIYKF 120 SRSKTENKMN DTNCKEFAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 3e-10 | NAC family protein |