PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP041989.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 268aa MW: 30675.1 Da PI: 9.3466

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP041989.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.8	7.6e-52	14	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lppGfrFhPtdeelv++yL++k+++++l + +i+e+d+yk++Pw+Lp+++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + + PCP041989.1 14 LPPGFRFHPTDEELVNHYLCRKCASQPLAV-PIIREIDLYKFDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKHIGK--PK 108 79***********************999.88***********7666789*********************************98..77 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 + g+kk Lvfy g+apkg kt+W+mheyrl PCP041989.1 109 ALGIKKALVFYAGKAPKGIKTNWIMHEYRL 138 8*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MSRGGDEQQQ QLELPPGFRF HPTDEELVNH YLCRKCASQP LAVPIIREID LYKFDPWQLP 60 EMALYGEKEW YFFSPRDRKY PNGSRPNRAA GTGYWKATGA DKHIGKPKAL GIKKALVFYA 120 GKAPKGIKTN WIMHEYRLAN VDRSAATAKK NQNLRLDDWV LCRIYNKKGS IEKYNVTTKM 180 TKYPEISDEQ KPDMTLMPPP PQAASNTHHM MDSSMDSVPR LPQTTTDYSS CSEHVLSPEV 240 AWEKESKIRG SILRFPTLKL KIALEDDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	1e-112	NAC family protein