PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP041809.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | YABBY | ||||||||
Protein Properties | Length: 87aa MW: 9707.25 Da PI: 7.2706 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 62.2 | 2.2e-19 | 13 | 58 | 4 | 49 |
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvn 49 ++ se++Cyv+CnfCnt+lav +P + + +vtv+CGhC++l ++ PCP041809.1 13 NQPSEHLCYVRCNFCNTVLAVGIPCKRFMDTVTVKCGHCSNLSFLS 58 5789************************************986554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 87 aa Download sequence |
MNMEEKVTMD LINQPSEHLC YVRCNFCNTV LAVGIPCKRF MDTVTVKCGH CSNLSFLSTR 60 PPLQGQCLPD HPTSLTLQVN ITNYSAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 3e-29 | YABBY family protein |