PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP041149.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

CPP

Protein Properties

Length: 788aa MW: 86189.7 Da PI: 5.3491

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP041149.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.7	7.2e-16	491	529	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C e C+C++C+Nk PCP041149.1 491 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQECFNKP 529 689**********************************96 PP
2	TCR	50.5	4e-16	576	614	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN PCP041149.1 576 RHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNA 614 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 788 aa Download sequence
MDTPERNQIG TPKAKFEDSP VFNYISSLSP IKPVKSVHIT QTFSSLSFAS LPSVFTSPHV 60 SSHKESRFLR RHNPSDLSKP ESSLESGNKV SVNEDAAELY INAEELHENC VPGDPVGETS 120 AEPPCEHSKF VIELPRNLKY DCGSPECDAT TSCGTEAGCE LEAAGLSAPL VPYAQKTSEN 180 GSSDGEGEAH LQNICQSGQR REGTGCDWES LISDATDLLI FDSPNASEAF RGIMQNPLDS 240 VTRFCNSLMP RLSQNDINDE QNVLVLDTVG SGEQPETEDP SSQYGEASQQ EDTELMQDHL 300 NSCMVSNQIE KEDQFNCKPG LNLHRGLRRR CLDFEMAEAR RKSLDNVPNS SSLLSQSDEK 360 ITTNDKQLVP MKPGGESARC ILPGIGLHLN ALATTSKDYK TIKRENMAYG RQLSLPNLSA 420 SAHSPTAGQG PGHESFSSAS SERDMDGTEN GVQLLQDASQ EPAFLANEEF NQNSPKKKRR 480 KFEQAGETES SCKRCNCKKS KCLKLYCECF AAGVYCIEPC SCQECFNKPI HEDTVLATRK 540 QIESRNPLAF APKVIRTADP VPEYGEESSK TPASARHKRG CNCKKSSCLK KYCECYQGGV 600 GCSISCRCEG CKNAFGRKDG SFVGTETEAD EEETEACDKS VAENHQQKNE IQKNEEQRQD 660 SALPSTPLRL SRQFSLPFSS KNKPPRSSTF NIGSSSGLYT ITIQKLGKPN ILRPESNLEG 720 HNQAVPEDEM PEILQGDGSP STGIKTASPN GKRVSPPNNE FGPSPGRRAG RKLILQSIPS 780 FPSLTPQH

Sequence ? help Back to Top

Protein Sequence Length: 788 aa Download sequence

MDTPERNQIG TPKAKFEDSP VFNYISSLSP IKPVKSVHIT QTFSSLSFAS LPSVFTSPHV  60
SSHKESRFLR RHNPSDLSKP ESSLESGNKV SVNEDAAELY INAEELHENC VPGDPVGETS  120
AEPPCEHSKF VIELPRNLKY DCGSPECDAT TSCGTEAGCE LEAAGLSAPL VPYAQKTSEN  180
GSSDGEGEAH LQNICQSGQR REGTGCDWES LISDATDLLI FDSPNASEAF RGIMQNPLDS  240
VTRFCNSLMP RLSQNDINDE QNVLVLDTVG SGEQPETEDP SSQYGEASQQ EDTELMQDHL  300
NSCMVSNQIE KEDQFNCKPG LNLHRGLRRR CLDFEMAEAR RKSLDNVPNS SSLLSQSDEK  360
ITTNDKQLVP MKPGGESARC ILPGIGLHLN ALATTSKDYK TIKRENMAYG RQLSLPNLSA  420
SAHSPTAGQG PGHESFSSAS SERDMDGTEN GVQLLQDASQ EPAFLANEEF NQNSPKKKRR  480
KFEQAGETES SCKRCNCKKS KCLKLYCECF AAGVYCIEPC SCQECFNKPI HEDTVLATRK  540
QIESRNPLAF APKVIRTADP VPEYGEESSK TPASARHKRG CNCKKSSCLK KYCECYQGGV  600
GCSISCRCEG CKNAFGRKDG SFVGTETEAD EEETEACDKS VAENHQQKNE IQKNEEQRQD  660
SALPSTPLRL SRQFSLPFSS KNKPPRSSTF NIGSSSGLYT ITIQKLGKPN ILRPESNLEG  720
HNQAVPEDEM PEILQGDGSP STGIKTASPN GKRVSPPNNE FGPSPGRRAG RKLILQSIPS  780
FPSLTPQH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	475	481	PKKKRRK
2	476	480	KKKRR
3	476	481	KKKRRK
4	477	481	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-158	CPP family protein