PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP040501.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 388aa MW: 43744.8 Da PI: 5.8634

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP040501.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.6	7.2e-51	14	149	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk........kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 + pGfrFhPtdeelv +yLk+k ++ l++ e ik+vdiyk++PwdLp+ ++++ekewyf+++rd+ky++++r+nr+t +g+Wkatg+d+ PCP040501.1 14 MLPGFRFHPTDEELVGFYLKRKFQQGVLPI-ELIKQVDIYKYDPWDLPNcissvqaeLASTGEKEWYFYCPRDRKYKNSTRPNRVTGAGFWKATGTDR 110 579*************************.89***********7577666643344889****************************** PP NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +v+s+ +++ +glkk+Lvfy+gra kg ktdW+mhe+rl PCP040501.1 111 PVYSSeGSKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRL 149 956677*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MEQKNEMEKV DDVMLPGFRF HPTDEELVGF YLKRKFQQGV LPIELIKQVD IYKYDPWDLP 60 NCISSVQAEL ASTGEKEWYF YCPRDRKYKN STRPNRVTGA GFWKATGTDR PVYSSEGSKC 120 IGLKKSLVFY RGRAAKGIKT DWMMHEFRLP SLSNSVPPKK LLDKSLPAND SWAICRIFKK 180 TNSMAQRALS HSWDSQFPEP TAAGLFTQQF SSEDMSCTTD MGSTMQFWNN NDLQQASNTN 240 YSSFDTLPYK PINPTVSKPS MFDGEFPNSF MFSPAELSGT MNPALIDDLS NPAGSIDFDG 300 SQQQFSRLFD QFAATDQMQG NTGTSENEGG FRKNMNSSSN STSQWGSSSI RSIGFPFSLA 360 SDDESWKPTL PSYSPPYPSS YSTNKCYT

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MEQKNEMEKV DDVMLPGFRF HPTDEELVGF YLKRKFQQGV LPIELIKQVD IYKYDPWDLP  60
NCISSVQAEL ASTGEKEWYF YCPRDRKYKN STRPNRVTGA GFWKATGTDR PVYSSEGSKC  120
IGLKKSLVFY RGRAAKGIKT DWMMHEFRLP SLSNSVPPKK LLDKSLPAND SWAICRIFKK  180
TNSMAQRALS HSWDSQFPEP TAAGLFTQQF SSEDMSCTTD MGSTMQFWNN NDLQQASNTN  240
YSSFDTLPYK PINPTVSKPS MFDGEFPNSF MFSPAELSGT MNPALIDDLS NPAGSIDFDG  300
SQQQFSRLFD QFAATDQMQG NTGTSENEGG FRKNMNSSSN STSQWGSSSI RSIGFPFSLA  360
SDDESWKPTL PSYSPPYPSS YSTNKCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	1e-98	NAC family protein