PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP039927.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | SBP | ||||||||
Protein Properties | Length: 83aa MW: 9522.78 Da PI: 10.727 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 53.3 | 7.1e-17 | 4 | 35 | 46 | 77 |
TSSEEETTT--SS--S-STTTT-------S-- CS SBP 46 CsrfhelsefDeekrsCrrrLakhnerrrkkq 77 C rfh+l efD++krsCrrrLa+hnerrrk+ PCP039927.1 4 CCRFHQLPEFDDTKRSCRRRLAGHNERRRKNP 35 9*****************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 83 aa Download sequence |
MLLCCRFHQL PEFDDTKRSC RRRLAGHNER RRKNPAESHA VEGSIRNVGA GTQFKDVCGQ 60 VDDSGRIRIT IPGNSTHKHF HIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53160.1 | 2e-17 | SBP family protein |