PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP039183.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 272aa    MW: 31299.5 Da    PI: 6.2363
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP039183.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.38.7e-51101381129
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 
                  lppGfrF P+deelv++yL kk+++++     ++ e+d++++ePw+Lp+ +k + +ewyfFs rd+kyatg r+nrat+sgyWkatgkd+ v++  +g
  PCP039183.1  10 LPPGFRFYPSDEELVCHYLYKKITNEEALK-GTLVEIDLHTCEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRMVMEPgTG 106
                  79***********************99544.78***************88888999**************************************9888 PP

          NAM  98 elvglkktLvfykgrapkgektdWvmheyrle 129
                  e vg++ktLvfy++rap+g kt W+mhe+rle
  PCP039183.1 107 EIVGMRKTLVFYRNRAPNGIKTGWIMHEFRLE 138
                  99***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MGLRDIGATL PPGFRFYPSD EELVCHYLYK KITNEEALKG TLVEIDLHTC EPWQLPEVAK  60
LNANEWYFFS FRDRKYATGF RTNRATTSGY WKATGKDRMV MEPGTGEIVG MRKTLVFYRN  120
RAPNGIKTGW IMHEFRLETP HMPPKEDWVL CRVFHKGKGA ENSTKLSPHD LMLETTPCTV  180
PLNLAPSPPT HDQTMPCVYN HNQSNSFLNL LQLSHQEKYT NSSIPELNAK NNCDYGFLWD  240
MNLEDGSFDN EVAPNLDEMR FEVDGTAWFC SK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.13e-92NAC family protein