PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP038682.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 315aa    MW: 34047.9 Da    PI: 4.9414
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP038682.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA504.1e-16206242135
         GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C++Cg+++  Tp +Rrgp g++tLCnaCGl+++ kg+
  PCP038682.1 206 CQHCGVSEnnTPAMRRGPAGPRTLCNACGLMWANKGT 242
                  *******99*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MAAVNPQPLE AGPFEEHGSG PIQVEDDDGD YEDGGDDGME DMEEVHVNPV SVAERGGGGG  60
GGGVVMASRT SELTLSFEGE VYVFPAVTPE KVQAVLLLLG GRDVPTGVPT VEVSYNQNPR  120
GVGDTPKRSN LSRRIASLVR FREKRKERCF DKKIRYTVRK EVAQRMLRKN GQFASLKQTS  180
GTSSLDTTQS CLQDGTPQPE TVIRRCQHCG VSENNTPAMR RGPAGPRTLC NACGLMWANK  240
GTLRDLSKGG RNLTMDNIEP GTPTEVKPSV VEGEFSRNQD ERGILDGLSK NVTEGSNDAS  300
VNPDDEECIA FKHSP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124129DTPKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.22e-72GATA family protein