PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP038266.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | C3H | ||||||||
Protein Properties | Length: 85aa MW: 9525.23 Da PI: 4.6658 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 43.3 | 6e-14 | 53 | 75 | 4 | 26 |
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 e C+++++tG Ck+G++CkF+H+ PCP038266.1 53 EDCSYYLKTGSCKFGSNCKFNHP 75 89********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 85 aa Download sequence |
MELSEQSEQS DGGEGWGGNQ GWEGDGGGVE EKKAVETQES NRRYQYPVRP EAEDCSYYLK 60 TGSCKFGSNC KFNHPVRRKP NQDCS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63260.2 | 1e-16 | C3H family protein |