PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP037824.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 432aa    MW: 46253.9 Da    PI: 8.3314
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP037824.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1214.3e-38141201262
       zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                  +e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GG+lr vPvGgg+r+nkks+
  PCP037824.1 141 PETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGSLRSVPVGGGCRRNKKSK 201
                  67899*****************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MVFRSGSERR PRPFQQGYWL RVQIELDGAG GKAGGVGAES ESRDAVAVVE EELGRAGQDK  60
RVVDSYCGVG GGGPHDVQPN HHPLGSATTG SENLHELPPL PPPPSLTHVG GAANIGGGGG  120
PGSIRPSSMS DRARLAKIPQ PETALKCPRC ESTNTKFCYF NNYSLSQPRH FCKTCRRYWT  180
RGGSLRSVPV GGGCRRNKKS KSNNSSNSSR SKSPVATGDH IQTGSNSITN NSSDHMIGNI  240
THHFSNLPPS THQSLPFLAS SIQSLGRYGG AGNMELNFNE IQQEETDHHH HHMGFQFHQI  300
AGGNNMNNLS GGILGGGHNN QWRNLNLQHI PFLGGTGFES STSTGLYPFQ TSDQGVDHQA  360
STHPMVGNNS RISTEQLPPP VKTEDNHGPS LMRPSLGTAI SPEINNSQFW GGNLNAWTDL  420
SGPNSSSTSH LL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02460.11e-40Dof family protein