PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP037573.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NF-YC | ||||||||
Protein Properties | Length: 161aa MW: 18799.3 Da PI: 6.1493 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 125.8 | 1.7e-39 | 61 | 157 | 3 | 95 |
NF-YC 3 ksfwekq...iekatdfk..nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdi 95 fw++q i ++t ++ +he+Plar+k+i+k+d +vk is+e+P+l+skacelfi+eltlrswlh+ee+krrtl+++di+ a+ + + dflv i PCP037573.1 61 DLFWNQQlfeI-QNTPVRktHHEFPLARVKRIMKSDGKVKLISSETPILFSKACELFIMELTLRSWLHTEESKRRTLQHCDISRAIRNDQLLDFLVSI 157 67*****6533.3333433689*************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MDLNHSINFS SSSSTSSPFD DFIPLDSFML PDCDPHLSTK EEEDHEAKRS SFTQLQKENI 60 DLFWNQQLFE IQNTPVRKTH HEFPLARVKR IMKSDGKVKL ISSETPILFS KACELFIMEL 120 TLRSWLHTEE SKRRTLQHCD ISRAIRNDQL LDFLVSIANL F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56170.1 | 1e-34 | NF-YC family protein |