PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP037267.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | GATA | ||||||||
Protein Properties | Length: 140aa MW: 15348.6 Da PI: 10.2203 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 58.8 | 7e-19 | 36 | 70 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk++ PCP037267.1 36 CADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRR 70 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence |
MSYRMLDPSD KGSESDEMTI KTPDAGSSEE GFKKTCADCG TSKTPLWRGG PAGPKSLCNA 60 CGIRSRKKRR AILGLNKENP NDKKGKKNKQ LGDGLKQRLL ALGREVLMQR STVERQQRKL 120 GEEEQAAVLL MALSYGSVYA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 67 | 87 | KKRRAILGLNKENPNDKKGKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06740.1 | 1e-54 | GATA family protein |