PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PCP037149.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 176aa MW: 19721.3 Da PI: 7.2898 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 140.3 | 6.6e-44 | 7 | 106 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +Ca+C++lrr+Cak+C++apyfp+++p+kfa+vhk+FGasnv+k+l++lp ++r da+sslvyeA+ar+rdPvyG+vg i+ lq+q+++l+ +la+++ PCP037149.1 7 PCASCRLLRRRCAKGCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPIHQRGDAVSSLVYEANARMRDPVYGCVGAISFLQNQVSELQMQLAVAQ 104 7**********************************************************************************************998 PP DUF260 99 ee 100 +e PCP037149.1 105 AE 106 76 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 176 aa Download sequence |
MGSGSSPCAS CRLLRRRCAK GCIFAPYFPS DDPHKFAIVH KVFGASNVSK MLQELPIHQR 60 GDAVSSLVYE ANARMRDPVY GCVGAISFLQ NQVSELQMQL AVAQAETLCF QMQQDPVALP 120 TQIDQHQHHH QHQDHDQKSL LLSNSDFNSI PHQYFSSFAS PSNVIQDPLK RESLWT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G30130.1 | 7e-69 | LBD family protein |