PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP036953.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 209aa    MW: 23718.6 Da    PI: 5.8441
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP036953.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.000342951123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 + C+ C++ F++   L  H+++H
  PCP036953.1 29 FACSFCKREFRSAQALGGHMNVH 51
                 78*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MLKGSRSMDC INFFEGENLC DNSWPTRNFA CSFCKREFRS AQALGGHMNV HRRDRARLRL  60
LPPTLSSEIC PQIPSPNPSS YFSTSSSSSL SSCHSLFSPS LRTLVSTPSS ASSMDENKKP  120
RYDYWPENHF PDLIPKKGMG GGVDHEAGQI FKGFAQRDDE YFNKIDPEEE NKIIRVDLEL  180
HLDLDLDLDI GLLKDHKEEV DLELRLGHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.14e-13C2H2 family protein