PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP036909.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 694aa MW: 78918.6 Da PI: 6.1161

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP036909.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.3	2.4e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 lppGfrFhPtdeelv +yLk+k++g+k+el evi+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v s + PCP036909.1 6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EVIAEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVNS-Q 101 79**************************.99***********6434555777**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 +++vg+kktLv+y+grap+g +tdWvmheyrl PCP036909.1 102 TRAVGMKKTLVYYRGRAPHGIRTDWVMHEYRL 133 999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 694 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEVIAE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QTRAVGMKKT LVYYRGRAPH 120 GIRTDWVMHE YRLDERECET AQGLQVQDAY ALCRIFKKTA TGPKIGEHYG STSTTNYQLT 180 SDHSSSVNEL YSDGGRCEDF ESSSYPMQMH NACSSSPNFV HKNSLDDMGR KRDGKWTQFL 240 SKEAFNCSSS FSPFPNHENV SHPPSKVDIA LECARLQHRL SLPPLEVEDF PQVGLTDFKT 300 MQYSNPALDT TSTETDALQE ILSVAHVSQE MVNQSSNLVD QTWGGNYAPP ANDFSFMVDR 360 DAHYNQITDH LNSMRYVDKK TWGNSYTRSI EIGDLKDDFR MENTAENLRW IGMSDKDLEK 420 SFTEEHKIIP IENISSFRGE EEEQHYEAQG GPGHRSGIIK ELNDNEANDD DFSLSFINED 480 PNENFLHDGN MDDYSTSPSF EVIEEVQVNH GMFVSTRQVA ETFFHQLVPS QTVKVHLNPV 540 FGQNLLVERV VTQTKSEGRG SFFERFKELV MEKFDGIAKS TKPWRKIAST LVCAVTLILM 600 HMIIYLGQHM EDEKLMDAFT TTTTATIVEE KGNSNISKKE GLGLIKWSNK KEKVCLVNIR 660 GGNSCSVFLK KMGIFLTVSL ALGTMWANHN IIPS

Sequence ? help Back to Top

Protein Sequence Length: 694 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEVIAE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QTRAVGMKKT LVYYRGRAPH  120
GIRTDWVMHE YRLDERECET AQGLQVQDAY ALCRIFKKTA TGPKIGEHYG STSTTNYQLT  180
SDHSSSVNEL YSDGGRCEDF ESSSYPMQMH NACSSSPNFV HKNSLDDMGR KRDGKWTQFL  240
SKEAFNCSSS FSPFPNHENV SHPPSKVDIA LECARLQHRL SLPPLEVEDF PQVGLTDFKT  300
MQYSNPALDT TSTETDALQE ILSVAHVSQE MVNQSSNLVD QTWGGNYAPP ANDFSFMVDR  360
DAHYNQITDH LNSMRYVDKK TWGNSYTRSI EIGDLKDDFR MENTAENLRW IGMSDKDLEK  420
SFTEEHKIIP IENISSFRGE EEEQHYEAQG GPGHRSGIIK ELNDNEANDD DFSLSFINED  480
PNENFLHDGN MDDYSTSPSF EVIEEVQVNH GMFVSTRQVA ETFFHQLVPS QTVKVHLNPV  540
FGQNLLVERV VTQTKSEGRG SFFERFKELV MEKFDGIAKS TKPWRKIAST LVCAVTLILM  600
HMIIYLGQHM EDEKLMDAFT TTTTATIVEE KGNSNISKKE GLGLIKWSNK KEKVCLVNIR  660
GGNSCSVFLK KMGIFLTVSL ALGTMWANHN IIPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-164	NAC family protein