PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP036857.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 178aa MW: 20781.3 Da PI: 7.3214 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 91.3 | 1.7e-28 | 8 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevd...iykvePwdLpkkvkaeekewyfFskrdkkyat.gkrkn.ratk..sgyWk.atgkdk 90 lp+GfrF Ptdeelv++yL +kv +++++++ i+e+d y+ +P++L +++ +e+ew+fF+++ ++++ ++r++ r++ g+Wk + g+++ PCP036857.1 8 LPVGFRFMPTDEELVTHYLMNKVLYRPVPAAQEIREIDaarFYSNHPKNLV-TFSCGEREWFFFIHQGESSHAsQTRSSiRVVGngLGFWKpEYGSET 104 79*************************888776666653448999*****6.777899******9998876641333331454434689**778**** PP NAM 91 evlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128 ++++++g+ k +L++++g +a+++++t+W m ey l PCP036857.1 105 PICDEDGSFFASKISLTYFSGrSASHAKRTHWKMVEYYL 143 *******************995678899*********87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MIIGSNQLPV GFRFMPTDEE LVTHYLMNKV LYRPVPAAQE IREIDAARFY SNHPKNLVTF 60 SCGEREWFFF IHQGESSHAS QTRSSIRVVG NGLGFWKPEY GSETPICDED GSFFASKISL 120 TYFSGRSASH AKRTHWKMVE YYLHEHDHVE SNTEEKYQVR RREWIVGRMI RGTDYTGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 1e-18 | NAC family protein |