PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP036833.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 327aa    MW: 36285.5 Da    PI: 7.0028
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP036833.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof128.22.4e-4052112262
       zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                  +++alkcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+s
  PCP036833.1  52 HDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVS 112
                  7899******************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MGHNSLQVCM DSSDWLQGTI REDSPMDSSS PLSGDMLTCS RPLVERRLRP QHDQALKCPR  60
CDSTHTKFCY YNNYSLSQPR YFCKTCRRYW TKGGTLRNIP VGGGCRKNKK VSSKKPNDQS  120
PSSLMNQHHH PGSSSSSISH IPTDLHLSFP DQMQFSHLNN LMLGSNMNPS SFMDNSNPRP  180
IDFMESKLEA IVENARNYDF MGGGADLGMM GGYGNNMGGV SHGLDHQSSF NGICSSPFGM  240
SSLDGQNGNF MDSCQRLMLP YDQANHEDHH QINAMDVKPN TKLLSLEWQD QAGCSDLGKD  300
SFGYLNGLGS WSNVMNSYVP STTNPLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62940.18e-50Dof family protein