PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP036627.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB_related | ||||||||
Protein Properties | Length: 193aa MW: 22492.5 Da PI: 10.6988 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.1 | 3.6e-12 | 37 | 86 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 ++WT+eE+ l+ +v ++G g W+tI + +R+ ++k++w++ PCP036627.1 37 QKWTAEEESALKAGVIKHGAGKWRTILKDPEfsgvlYTRSNVDLKDKWRN 86 69***********************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MNSDTTIKSR AELSKMLDLR REKERELCFQ ASPKRLQKWT AEEESALKAG VIKHGAGKWR 60 TILKDPEFSG VLYTRSNVDL KDKWRNMSVM ANGWGSREKA RTALRTLWLS VMLLKAMMKT 120 WKLSLFQLPV RPSRFLVPEN LFFETNKSCA IRQVDLFVNV IHDILKGLDW LDMEAITRLR 180 SLVDLIKRLL LDI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49950.1 | 4e-40 | MYB_related family protein |